Information for 4-TGMCCWSKGGTTGGSA (Motif 8)

A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C G T A C C G T A C G T A A G T C A G T C G T C A A T G C C G A T A C T G A C T G A C G T A G T C C G T A
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.862
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 23.1bp
Average Position of motif in Background61.0 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGMCCWSKGGTTGGSA
NTGCCCANNGGTNA---
 A C G T A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA-
--------GGTTGGCAT
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA----
----NGTAGGTTGGCATNNN
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA--
--------NNTTGGCANN
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGMCCWSKGGTTGGSA
CTGACCTTTG-------
 A C G T A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA--
---------NTTGGCANN
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA----
TGGCCACCAGGTGGCACTNT
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:10
Orientation:forward strand
Alignment:TGMCCWSKGGTTGGSA
----------TTGGCA
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA-
---------CTTGGCAA
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGMCCWSKGGTTGGSA
----CTGTGGTTTN--
 A C G T A C T G T G C A A G T C G T A C C G T A A T C G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A T G C C G T A
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T