Information for 9-CTGGCCTTGT (Motif 16)

G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
Reverse Opposite:
T C G A T G A C C G T A C G T A C T A G T A C G A G T C G A T C C G T A A C T G
p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.688
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.01%
Number of Background Sequences with motif1305.1
Percentage of Background Sequences with motif2.77%
Average Position of motif in Targets49.2 +/- 28.5bp
Average Position of motif in Background51.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCTTGT
BNTGDCCTTG-
 A C G T G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCTTGT----
GCTGACCTTGAACTN
 A C G T G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTGT-
-TGACCTTGAV
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGGCCTTGT-
-TGACCTTGAN
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCTTGT
NNACTTGCCTT--
 A C G T A C G T A C G T G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTTGT
CTGACCTTTG
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGGCCTTGT
NTGACCTTGA
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTTGT
GTGACCTT--
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTTGT
ATGACCTTGA
 G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCTTGT
GGTCTGGCAT---
 A C G T A C G T A C G T G T A C G C A T C T A G C T A G A T G C G A T C G C A T A C G T A C T G A G C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T