Information for 6-ACAGAGGCCTCTTGTA (Motif 14)

C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
Reverse Opposite:
C G A T C G T A G T A C C G T A C T G A C T A G C G T A A C T G A C T G G T A C A G T C A C G T A G T C C G A T A C T G A C G T
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 24.9bp
Average Position of motif in Background63.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACAGAGGCCTCTTGTA
ACAAAGGNBCCT----
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACAGAGGCCTCTTGTA
----AGGCCTNG----
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACAGAGGCCTCTTGTA
--CTAGGCCT------
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACAGAGGCCTCTTGTA
--TAAGGCGTCTTG--
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACAGAGGCCTCTTGTA
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGGCCTCTTGTA
AACAAAGG---------
 A C G T C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGGCCTCTTGTA
AAAACAAAGG---------
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:ACAGAGGCCTCTTGTA----
ANAGTGCCACCTGGTGGCCA
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:ACAGAGGCCTCTTGTA
-TAGAANVTTCTAGAA
 C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.45
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGGCCTCTTGTA
GGAACAAAGR---------
 A C G T A C G T A C G T C G T A G T A C C G T A A C T G C G T A A C T G A C T G A G T C G T A C A C G T A G T C A G C T C G A T A C T G A C G T C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T