Information for 11-GTCATTCACCTCT (Motif 12)

A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G T C G A A C T G A C T G A C G T C T A G C G T A G T C A A C G T A C T G G C T A T A G C
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 23.7bp
Average Position of motif in Background50.6 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCATTCACCTCT
AGGTCANTGACCTN-
 A C G T A C G T A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCATTCACCTCT----
NNNNTTGACCCCTNNNN
 A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCATTCACCTCT
SCTGTCAVTCAV----
 A C G T A C G T A C G T A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCATTCACCTCT
NCTGTCAATCAN----
 A C G T A C G T A C G T A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTCATTCACCTCT
-----TGACCYCT
 A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCATTCACCTCT----
NNANTTGACCCCTNNNN
 A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCATTCACCTCT-
----TTCACACCTT
 A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCATTCACCTCT
TGACCTTGACCT--
 A C G T A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCATTCACCTCT
TGACCTTGACCT--
 A C G T A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTCATTCACCTCT
-----TCACACCT
 A T C G C A G T G T A C C G T A A C G T A C G T A G T C C G T A G T A C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T