Information for 6-GCCGCCATCTTGG (Motif 5)

C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
Reverse Opposite:
G A T C G A T C C G T A C T G A T A C G C G T A C G A T A C T G C T A G G T A C A C T G T C A G G A T C
p-value:1e-16
log p-value:-3.828e+01
Information Content per bp:1.761
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif224.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets46.8 +/- 25.9bp
Average Position of motif in Background55.8 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGG
GCCGCCATCTTG-
 C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGG
GCNGCCATCTTG-
 C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATCTTGG
GTCCGCCATTA---
 A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGCCATCTTGG
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCCATCTTGG
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGG
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGG
---GCCATCTGTT
 C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCATCTTGG---
CCNNACCATCTGGCCTN
 A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGG
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C T G A C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T C T A G C T A G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T