Information for 21-ACTGCAGTGC (Motif 29)

C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A C T G A G T C C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.963
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.5 +/- 29.1bp
Average Position of motif in Background54.6 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTGC----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGTGC
CGACCAACTGCCGTG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTGC
CCCCCTGCTGTG-
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTGC--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACTGCAGTGC-
-CTYRAGTGSY
 C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACTGCAGTGC
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTGCAGTGC-
-BTBRAGTGSN
 C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTGC--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTGCAGTGC------------
--TGCAGTTCCNNNNNTGGCCA
 C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G G A T C G C T A T C A G G A C T C G A T G T A C G A T C G T C A T C G A T G A C C G T A C T A G G A C T C T A G C T A G G T A C A G T C C G T A

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGTGC
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A G T C G T C A A C T G A C G T A C T G A G T C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C