Information for 16-CGACCCTGACCTG (Motif 24)

A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A C T G A C T G A C G T A G T C C T A G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 26.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGACCTG
TGACCTTGACCT-
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGACCCTGACCTG
TGACCTTGACCT-
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CGACCCTGACCTG
------TGACCT-
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CGACCCTGACCTG-
------TGACCTYA
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGACCCTGACCTG
GCTGACCTTGAACTN
 A C G T A C G T A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGACCCTGACCTG
----CCTCACCTG
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CGACCCTGACCTG---
------TGACCTTGAT
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGACCCTGACCTG
NNCNTGACCCCGCTCT-
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CGACCCTGACCTG--
-----CTGACCTTTG
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGACCCTGACCTG
--NNACTTACCTN
 A G T C A C T G C G T A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G