Information for 8-GAAGGAAGYCTGGACC (Motif 23)

A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
Reverse Opposite:
T A C G A C T G A C G T A T G C A G T C G T C A A C T G T C G A G T A C G A C T A G C T A T G C A G T C A G C T A C G T T A G C
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.9 +/- 16.1bp
Average Position of motif in Background63.1 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAAGGAAGYCTGGACC
---VBSYGTCTGG---
 A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAGYCTGGACC-
GGAAGGAAGGAAGGAAGG
 A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GAAGGAAGYCTGGACC
-----TWGTCTGV---
 A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GAAGGAAGYCTGGACC-----
------TGCCTGCGYCMCCTT
 A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAAGYCTGGACC
GTCATGCHTGRCTGS---
 A C G T A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GAAGGAAGYCTGGACC
-----CTGTCTGG---
 A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAGYCTGGACC
NGAAGC-----------
 A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAGYCTGGACC
ANCAGGAAGT-------
 A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAAGYCTGGACC
TGACANARRCCAGRC--
 A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAAGYCTGGACC
ACAAAGGNBCCT-----
 A C G T A T C G C G T A C T G A C T A G A T C G T C G A C G T A A C T G A G C T A G T C A C G T A C T G T A C G G T C A T G A C A T G C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T