Information for 7-GCCCTTAAGAAAGATG (Motif 22)

C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T A T G C C G A T A G C T A C G T A T G C G A C T A C G T T G C A G T C A C T A G C A T G C T A G A G T C
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.734
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.1 +/- 24.6bp
Average Position of motif in Background56.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG-----
----NNNNNATTGATGNGTGN
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG--
------ATGATKGATGRC
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG
----GGAACAAAGR--
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG--
--------AACAGATGGT
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG-
-------TGATTGATGA
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG----
---NNTAAAAACGATGTTNT
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG
-------ACAAAG---
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GCCCTTAAGAAAGATG
----VRRACAAWGG--
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:GCCCTTAAGAAAGATG------
-----AAGGCCAGATGGTCCGG
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GCCCTTAAGAAAGATG----
-------AAGATGATGTCAT
 C T A G G A T C G A T C A G T C A C G T A C G T T C G A C G T A A T C G G T C A C T G A C G T A A T C G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T