Information for 6-RGCRRRYRGASAGCAG (Motif 16)

C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G C T A T G C A C G T A G T C A G T C C T A G A G T C A G T C A G T C A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 27.2bp
Average Position of motif in Background52.3 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RGCRRRYRGASAGCAG--
---AGAGRRACAGCWGAC
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG--
---TGACANARRCCAGRC
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG----
--------CACAGCAGGGGG
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.51
Offset:8
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG---
--------AACAGCTGCAG
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG
--------AACAGCTG
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG---
--------GACAGCTGCAG
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:10
Orientation:forward strand
Alignment:RGCRRRYRGASAGCAG
----------CAGCC-
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:RGCRRRYRGASAGCAG--
-----NGNGACAGCTGCN
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:RGCRRRYRGASAGCAG---
--------GTCAGCANNTN
 C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RGCRRRYRGASAGCAG---
TGGCCACCAGGTGGCACTNT
 A C G T C T A G A C T G A G T C C T A G C T A G C T A G A G T C C T A G A C T G G T C A A T C G C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T