Information for 14-GCCCHAGGATGGC (Motif 15)

A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A G C T A T G C A G T C A C G T C G T A A C T G A T C G A C T G A T G C
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.824
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.9 +/- 23.5bp
Average Position of motif in Background40.2 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCCHAGGATGGC
NTGCCCANNGGTNA-
 A C G T A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCHAGGATGGC
GGCACCCAGGGGTGC
 A C G T A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCCCHAGGATGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCHAGGATGGC-----
--NGTAGGTTGGCATNNN
 A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCHAGGATGGC
AGCCTCAGGCA---
 A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCHAGGATGGC
CGCCTCAGGCA---
 A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCHAGGATGGC
AGCCTCAGGCA---
 A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCCHAGGATGGC
CACCCCCGGGGGGG
 A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCCHAGGATGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCCCHAGGATGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G A G T C A T G C A G T C G A C T G T C A A C T G A T C G C T G A A C G T A C T G C T A G A T G C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A