Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-62 | -1.441e+02 | 0.0000 | 44.0 | 4.99% | 35.1 | 0.08% | motif file (matrix) |
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2 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-44 | -1.016e+02 | 0.0000 | 69.0 | 7.82% | 358.3 | 0.79% | motif file (matrix) |
svg |
3 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-33 | -7.625e+01 | 0.0000 | 86.0 | 9.75% | 876.0 | 1.92% | motif file (matrix) |
svg |
4 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-5 | -1.223e+01 | 0.0004 | 52.0 | 5.90% | 1364.8 | 3.00% | motif file (matrix) |
svg |
5 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-4 | -1.046e+01 | 0.0021 | 117.0 | 13.27% | 4140.0 | 9.10% | motif file (matrix) |
svg |
6 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -7.640e+00 | 0.0292 | 36.0 | 4.08% | 1011.6 | 2.22% | motif file (matrix) |
svg |
7 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-3 | -7.430e+00 | 0.0308 | 29.0 | 3.29% | 761.6 | 1.67% | motif file (matrix) |
svg |
8 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.065e+00 | 0.0389 | 144.0 | 16.33% | 5754.1 | 12.64% | motif file (matrix) |
svg |
9 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.863e+00 | 0.0423 | 3.0 | 0.34% | 10.2 | 0.02% | motif file (matrix) |
svg |
10 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-2 | -6.680e+00 | 0.0457 | 37.0 | 4.20% | 1108.1 | 2.43% | motif file (matrix) |
svg |
11 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -6.424e+00 | 0.0537 | 233.0 | 26.42% | 10090.3 | 22.17% | motif file (matrix) |
svg |
12 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.256e+00 | 0.0582 | 91.0 | 10.32% | 3447.5 | 7.57% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.907e+00 | 0.0762 | 8.0 | 0.91% | 120.7 | 0.27% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.853e+00 | 0.0762 | 66.0 | 7.48% | 2388.6 | 5.25% | motif file (matrix) |
svg |
15 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -5.449e+00 | 0.1043 | 17.0 | 1.93% | 421.3 | 0.93% | motif file (matrix) |
svg |
16 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.396e+00 | 0.1043 | 38.0 | 4.31% | 1240.3 | 2.72% | motif file (matrix) |
svg |
17 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.278e+00 | 0.1092 | 250.0 | 28.34% | 11159.3 | 24.52% | motif file (matrix) |
svg |
18 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.269e+00 | 0.1092 | 17.0 | 1.93% | 429.9 | 0.94% | motif file (matrix) |
svg |
19 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.115e+00 | 0.1151 | 106.0 | 12.02% | 4285.9 | 9.42% | motif file (matrix) |
svg |
20 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -5.100e+00 | 0.1151 | 27.0 | 3.06% | 818.0 | 1.80% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.088e+00 | 0.1151 | 14.0 | 1.59% | 331.4 | 0.73% | motif file (matrix) |
svg |
22 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.813e+00 | 0.1344 | 4.0 | 0.45% | 40.1 | 0.09% | motif file (matrix) |
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