Motif 8

Information for 6-ATCACGCCTGACR (Motif 8)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.372e+01
Information Content per bp:	1.761
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.68%
Number of Background Sequences with motif	3.5
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	60.4 +/- 18.3bp
Average Position of motif in Background	56.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)	-0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:	1
Score:	0.68
Offset:	1
Orientation:	reverse strand
Alignment:	ATCACGCCTGACR -TCACACCT----

MGA/MA0801.1/Jaspar

Match Rank:	2
Score:	0.67
Offset:	1
Orientation:	reverse strand
Alignment:	ATCACGCCTGACR -TCACACCT----

TBX1/MA0805.1/Jaspar

Match Rank:	3
Score:	0.67
Offset:	1
Orientation:	reverse strand
Alignment:	ATCACGCCTGACR -TCACACCT----

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:	4
Score:	0.67
Offset:	0
Orientation:	reverse strand
Alignment:	ATCACGCCTGACR TTCCCGCCWG---

PAX1/MA0779.1/Jaspar

Match Rank:	5
Score:	0.67
Offset:	-1
Orientation:	forward strand
Alignment:	-ATCACGCCTGACR--- CGTCACGCATGACTGCA

Pax6/MA0069.1/Jaspar

Match Rank:	6
Score:	0.66
Offset:	0
Orientation:	forward strand
Alignment:	ATCACGCCTGACR- TTCACGCATGAGTT

PAX9/MA0781.1/Jaspar

Match Rank:	7
Score:	0.66
Offset:	-1
Orientation:	forward strand
Alignment:	-ATCACGCCTGACR--- CGTCACGCATGACTGCA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:	8
Score:	0.65
Offset:	-2
Orientation:	reverse strand
Alignment:	--ATCACGCCTGACR NYTTCCCGCC-----

TBX4/MA0806.1/Jaspar

Match Rank:	9
Score:	0.65
Offset:	1
Orientation:	reverse strand
Alignment:	ATCACGCCTGACR -TCACACCT----

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:	10
Score:	0.64
Offset:	-1
Orientation:	reverse strand
Alignment:	-ATCACGCCTGACR TTTCCCGCCMAV--