Information for 5-TCCCATGAGCATG (Motif 5)

A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
Reverse Opposite:
A T G C G T C A A G C T A C T G A G T C G A C T T A G C G T C A A C G T A C T G A T C G A C T G G T C A
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.781
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif24.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.5 +/- 26.9bp
Average Position of motif in Background59.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCCCATGAGCATG
ANTCCCTNGGGAAT-
 A C G T A C G T A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCCCATGAGCATG
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCCATGAGCATG
TCCCNNGGGACN-
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCCATGAGCATG
HTTTCCCASG------
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCCATGAGCATG
TCCCCTGGGGAC-
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCCATGAGCATG
-CTCATTTGCATW
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCATGAGCATG
--CCATGTGCTT-
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TCCCATGAGCATG
NNNTCCATCCCATAANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCCATGAGCATG
-BTVATTWGCATA
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCCCATGAGCATG
GCGCATGCGCAC-
 A C G T A G T C A T G C A G T C G T C A A C G T A T C G C G T A A C T G T A G C T C G A A C G T A T C G
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T