Information for 8-CACCATGCTCTGK (Motif 11)

A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
Reverse Opposite:
G T A C A T G C G T C A A C T G C G T A A C T G A G T C C G T A A G C T A C T G A C T G C G A T A C T G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 28.8bp
Average Position of motif in Background42.8 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CACCATGCTCTGK
TACCCACAATGCATTG-
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACCATGCTCTGK
CCCCCTGCTGTG-
 A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACCATGCTCTGK
NNGCACCTTTCTCC--
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACCATGCTCTGK
GRACAGWMTGTYCTB-
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACCATGCTCTGK--
NNTCCTGCTGTGNNN
 A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACCATGCTCTGK
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CACCATGCTCTGK---------
--YCAGGCWCAGTACCAGGCTC
 A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACCATGCTCTGK
GGGAACACAATGTTCCC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACCATGCTCTGK
GGGTACATAATGTTCCC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CACCATGCTCTGK
GACCCCCCGCTGTG-
 A C G T A C G T A G T C C G T A A G T C A G T C C T G A A C G T A C T G A G T C C G A T A G T C A C G T A T C G A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T