Information for 5-AGAGGGCGCTGTC (Motif 7)

T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
Reverse Opposite:
T A C G T G C A A G T C C G T A A C T G A G T C C A T G A T G C A G T C A G T C A G C T A G T C A G C T
p-value:1e-17
log p-value:-4.028e+01
Information Content per bp:1.765
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif48.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.0 +/- 27.9bp
Average Position of motif in Background54.8 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTGTC-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCTGTC-
AAGGKGRCGCAGGCA
 A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTGTC
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTC-
NNVDGGGYGGGGCYN
 A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTC--
NNAGGGGCGGGGTNNA
 A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------AGAGGGCGCTGTC
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTC
NANAAGGGCGTGGTC
 A C G T A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGGGCGCTGTC
RGKGGGCGGAGC-
 T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGAGGGCGCTGTC
-------GCTGTG
 T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------AGAGGGCGCTGTC
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A C T A G A C T G A T C G G A T C T A C G G T A C C G A T A C T G A C G T A T G C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T