Information for 6-CTGGACTTTG (Motif 6)

A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G
Reverse Opposite:
A G T C C G T A T C G A C T G A A C T G A C G T A G T C G A T C C T G A T A C G
p-value:1e-18
log p-value:-4.205e+01
Information Content per bp:1.654
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.02%
Number of Background Sequences with motif1304.0
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets49.6 +/- 27.1bp
Average Position of motif in Background51.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACTTTG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG-------
-TGGACTTTGNNCTNTG
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG------
-TGGACTTTGNNCTCN
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTGGACTTTG-----
ATTGGACTTTGACCCC
 A C G T A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGGACTTTG
CTGACCTTTG
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG
-TTGACTTTT
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACTTTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG-----
-TGACCTTTGCCCTA
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGGACTTTG-----
-TGACCTTTGCCCCA
 A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGACTTTG
NCTGGAATGC-
 A C G T A T G C G A C T C T A G T C A G T G C A T G A C G A C T A G C T G C A T T C A G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T