Information for 8-YTCMGCRCCYTGGMYR (Motif 23)

A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
Reverse Opposite:
A G C T C T A G A C G T A T G C A G T C G T C A C T G A A C T G A C T G A G T C T A C G T A G C A C T G A C T G C G T A C T G A
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.801
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 20.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:YTCMGCRCCYTGGMYR-----
TTCAGCACCATGGACAGCGCC
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:YTCMGCRCCYTGGMYR-----
-TCAGCACCATGGACAGCTCC
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YTCMGCRCCYTGGMYR
GCTCCGCCCMCY-----
 A C G T A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--YTCMGCRCCYTGGMYR
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.52
Offset:9
Orientation:forward strand
Alignment:YTCMGCRCCYTGGMYR
---------TTGGCA-
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-YTCMGCRCCYTGGMYR
NGTCAGCANTTT-----
 A C G T A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:YTCMGCRCCYTGGMYR
-GCCCCGCCCC-----
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:YTCMGCRCCYTGGMYR
-GCCCCACCCA-----
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:YTCMGCRCCYTGGMYR
-GCCMCRCCCH-----
 A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-YTCMGCRCCYTGGMYR
NTCGCGCGCCTTNNN--
 A C G T A G C T A C G T A G T C G T A C A C T G A G T C C T A G A G T C A G T C A G C T A C G T A C T G A T C G T G C A G A T C C T G A
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T