Information for 11-CATGCCCCTGCACTCC (Motif 26)

A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C G T A C T G A G T C C G T A A C T G A C T G A C T G A T C G A G T C T C G A A C G T A C T G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.949
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 23.0bp
Average Position of motif in Background70.0 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGCCCCTGCACTCC-
AATCGCACTGCATTCCG
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATGCCCCTGCACTCC
ACATGCCCGGGCAT---
 A C G T A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATGCCCCTGCACTCC
CTACGCCCACGCACT--
 A C G T A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CATGCCCCTGCACTCC
--TGACCTTGACCT--
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATGCCCCTGCACTCC
-SNGCACCTGCHS---
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATGCCCCTGCACTCC
TTACGCCCACGCATTT-
 A C G T A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CATGCCCCTGCACTCC
TCCGCCCCCGCATT--
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATGCCCCTGCACTCC
GCTGACCTTGAACTN-
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATGCCCCTGCACTCC
--TGACCTTGACCT--
 A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CATGCCCCTGCACTCC
NNCNTGACCCCGCTCT--
 A C G T A C G T A G T C C G T A A C G T A C T G A T G C A G T C A G T C A G T C A C G T A C T G A G T C C G T A A G T C C G A T A G T C A G T C
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T