Motif 12

Information for 7-CGGTCCCGCTACG (Motif 12)

Reverse Opposite:

p-value:	1e-8
log p-value:	-1.891e+01
Information Content per bp:	1.866
Number of Target Sequences with motif	5.0
Percentage of Target Sequences with motif	0.52%
Number of Background Sequences with motif	3.1
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	59.8 +/- 23.5bp
Average Position of motif in Background	78.7 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)	-0.6
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.63
Offset:	1
Orientation:	forward strand
Alignment:	CGGTCCCGCTACG -GGCCCCGCCCCC

POL011.1_XCPE1/Jaspar

Match Rank:	2
Score:	0.61
Offset:	1
Orientation:	reverse strand
Alignment:	CGGTCCCGCTACG -GGTCCCGCCC--

PB0114.1_Egr1_2/Jaspar

Match Rank:	3
Score:	0.59
Offset:	-1
Orientation:	reverse strand
Alignment:	-CGGTCCCGCTACG-- NNAGTCCCACTCNNNN

POL013.1_MED-1/Jaspar

Match Rank:	4
Score:	0.59
Offset:	7
Orientation:	forward strand
Alignment:	CGGTCCCGCTACG -------GCTCCG

SP2/MA0516.1/Jaspar

Match Rank:	5
Score:	0.58
Offset:	2
Orientation:	forward strand
Alignment:	CGGTCCCGCTACG---- --GCCCCGCCCCCTCCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:	6
Score:	0.57
Offset:	0
Orientation:	reverse strand
Alignment:	CGGTCCCGCTACG NYTTCCCGCC---

PB0164.1_Smad3_2/Jaspar

Match Rank:	7
Score:	0.55
Offset:	-1
Orientation:	forward strand
Alignment:	-CGGTCCCGCTACG--- TACGCCCCGCCACTCTG

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:	8
Score:	0.54
Offset:	0
Orientation:	forward strand
Alignment:	CGGTCCCGCTACG CNGTCACGCCAC-

E2F4/MA0470.1/Jaspar

Match Rank:	9
Score:	0.54
Offset:	0
Orientation:	reverse strand
Alignment:	CGGTCCCGCTACG NNTTCCCGCCC--

POL003.1_GC-box/Jaspar

Match Rank:	10
Score:	0.54
Offset:	0
Orientation:	reverse strand
Alignment:	CGGTCCCGCTACG- NAGCCCCGCCCCCN