Information for 11-CCCGCCGACTCGC (Motif 11)

G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
Reverse Opposite:
A T C G A G T C A C T G C T G A C T A G A C G T A G T C A T C G A C T G A T G C A C T G A T C G A C T G
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 22.3bp
Average Position of motif in Background34.3 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGACTCGC
GCCCCGCCCCCTCCC
 A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGACTCGC
CCCCCGCCCCCGCC-
 A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCCGACTCGC
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCGCCGACTCGC-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCGCCGACTCGC-
TCCGCCCCCGCATT
 G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCGCCGACTCGC
YCCGCCCACGCN-
 G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCCGACTCGC
TTTCCCGCCMAV----
 A C G T A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCGACTCGC
GCCMCGCCCMCY---
 A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCGCCGACTCGC
-ACGCCCACGCA-
 G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCGACTCGC
GCTCCGCCCMCY---
 A C G T A C G T G T A C A T G C A G T C A T C G A G T C T A G C T C A G G T C A A G T C A G C T A G T C A C T G T A G C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T