Information for 5-CCAGAGAGSCTGGGSC (Motif 6)

T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C
Reverse Opposite:
A T C G A T C G T G A C T A G C A G T C T G C A A C T G A T G C A G T C C G A T G A T C A G C T A T G C G C A T A T C G A C T G
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.693
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.9 +/- 25.0bp
Average Position of motif in Background50.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC--
-NAGANTGGCGGGGNGNA
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC
----GGGGGCGGGGCC
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCAGAGAGSCTGGGSC
------WDNCTGGGCA
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC
GGGNGGGGGCGGGGC-
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC-
------NGCCTGAGGCN
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC
----GGGGGCGGGGC-
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC-
------TGCCTGAGGCN
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGAGAGSCTGGGSC---
----ATTGCCTGAGGCAAT
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCAGAGAGSCTGGGSC---
----ANTGCCTGAGGCAAN
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCAGAGAGSCTGGGSC-
---AGGGGGCGGGGCTG
 T G A C A T G C C G T A T A C G C T G A C T A G C G T A T A C G A T C G G T A C A C G T A C T G A T C G A C T G A T G C T A G C A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G