Information for 2-GGGAATCCGC (Motif 4)

C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
Reverse Opposite:
C A T G G A T C A C T G A T C G C G T A A G C T A G C T A G T C G T A C G A T C
p-value:1e-12
log p-value:-2.926e+01
Information Content per bp:1.666
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.18%
Number of Background Sequences with motif961.7
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets46.0 +/- 27.4bp
Average Position of motif in Background50.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCGC
GGGGGAATCCCC
 A C G T A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCGC-
AGGGGAATCCCCT
 A C G T A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGGAATCCGC-
AGGGGAATCCCCT
 A C G T A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCGC
CCWGGAATGY--
 A C G T A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGAATCCGC---
-SSAATCCACANN
 C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGAATCCGC
GGAAATCCCC
 C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGAATCCGC
NCTGGAATGC--
 A C G T A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGAATCCGC
NTGGAATGTN-
 A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGAATCCGC
NTGGAATGTG-
 A C G T C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGAATCCGC-
TCCAATCCACA
 C T A G C A T G C T A G T C G A T C G A G C A T T A G C T G A C C T A G G T A C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A