Information for 8-TTAAATTTTA (Motif 18)

A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A G T C A C G T A A C G T A C G T A C G T C T G A C T G A
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.6 +/- 18.7bp
Average Position of motif in Background35.1 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTAAATTTTA-
GGTTAAACATTAA
 A C G T A C G T A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTAAATTTTA-------
NTNAATTTTATTGNATT
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTAAATTTTA-------
-TNAATTTTATTACCTN
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTAAATTTTA-------
ANTAATTTTATGGCCGN
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAAATTTTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAAATTTTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTAAATTTTA-------
-NNANTTTTATTGGNNN
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAAATTTTA--------
--NAATTTTATTACCNNN
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAAATTTTA-
GTTAATNATTAA
 A C G T A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTAAATTTTA--------
--NAATTTTACGAGNTNN
 A G C T A G C T C G T A G T C A C G T A C G A T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T