Information for 5-GMCTKTGGGT (Motif 14)

A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T
Reverse Opposite:
T G C A T G A C A G T C A G T C C T G A G T A C C T G A T C A G C A T G T G A C
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.569
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.66%
Number of Background Sequences with motif804.0
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets48.7 +/- 21.3bp
Average Position of motif in Background50.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GMCTKTGGGT-
GTCTGTGGTTT
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GMCTKTGGGT--
--CTGTGGTTTN
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GMCTKTGGGT--
NNHTGTGGTTWN
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GMCTKTGGGT-
-GCTGTGGTTT
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GMCTKTGGGT-
-TATGCGGGTA
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GMCTKTGGGT----
NNNNATGCGGGTNNNN
 A C G T A C G T A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GMCTKTGGGT-
-NNTGTGGTTT
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GMCTKTGGGT--
-CATGCGGGTAC
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T A C G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GMCTKTGGGT--
GCCTCAGGGCAT
 A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GMCTKTGGGT-
TGCCCNGGGGCA
 A C G T A C T G G T A C A G T C G A C T C A T G G A C T T C A G T C A G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A