Information for 4-GGGAGCAAGA (Motif 10)

A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A C G T T A C G A G T C A C G T A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.897
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif310.0
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets33.9 +/- 24.6bp
Average Position of motif in Background49.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGAGCAAGA
GGGAGGACNG
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGAGCAAGA
CGGAGC----
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGAGCAAGA--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGAGCAAGA--
AGGTGHCAGACA
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGAGCAAGA---
AGGTGNCAGACAG
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGAGCAAGA-
-AGAGGAAGTG
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGCAAGA---
NNNNGGGGGAAGANGG
 A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T A C G T A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

ETV6/MA0645.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGAGCAAGA-
-AGCGGAAGTG
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGGAGCAAGA-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGAGCAAGA
-AGAGGAA--
 A C T G C T A G A C T G G T C A A C T G A T G C C G T A C G T A A C T G G T C A
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T