Information for 6-GAAATGACCTCDG (Motif 6)

C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
Reverse Opposite:
A G T C G A C T A T C G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.842
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 23.9bp
Average Position of motif in Background53.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GAAATGACCTCDG
----TGACCYCT-
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GAAATGACCTCDG
----TGACCTYA-
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GAAATGACCTCDG
----TGACCT---
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAAATGACCTCDG
---CTGACCTTTG
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAAATGACCTCDG
--CATGAC-----
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAATGACCTCDG---
TGTCGTGACCCCTTAAT
 A C G T C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAAATGACCTCDG---
NNANTTGACCCCTNNNN
 A C G T C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAATGACCTCDG---
NNNNTTGACCCCTNNNN
 A C G T C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAATGACCTCDG-
AGAAATGACTTCCCT
 A C G T C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATGACCTCDG
CNNTTGACCTTTG
 C T A G C G T A G T C A C G T A A C G T A C T G C T G A G T A C T A G C G A C T A T G C C G T A A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G