Information for 2-TGSGGGCTTCCTGCCT (Motif 3)

C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
Reverse Opposite:
C T G A A T C G A T C G G T A C C G T A A C T G A C T G T C G A C G T A A C T G G T A C A G T C G T A C A T G C A T G C C G T A
p-value:1e-16
log p-value:-3.700e+01
Information Content per bp:1.732
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 16.1bp
Average Position of motif in Background34.8 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGSGGGCTTCCTGCCT
--CTGGCAGNCTGCCA
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGSGGGCTTCCTGCCT-
-CTTGGCANNNTGCCAA
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGSGGGCTTCCTGCCT
NNNATTGGGGGTNTCCT----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
--TTGGCATGGTGCCA
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
----CACTTCCTGT--
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGSGGGCTTCCTGCCT
-----GCTTCC-----
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
----GGCGCGCT----
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
----NGCTN-------
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
-----ACTTCCGGTN-
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGSGGGCTTCCTGCCT
-----ACTTCCGGTT-
 C G A T A T C G A T C G C A T G A C T G A C T G A G T C C G A T A G C T T G A C G T A C C G A T A C T G A T G C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T A C G T