Information for 5-GTGGCCCACA (Motif 18)

A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A
Reverse Opposite:
G C A T A T C G C G A T A T C G A T C G A T C G T G A C G T A C T G C A G T A C
p-value:1e-6
log p-value:-1.551e+01
Information Content per bp:1.821
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif126.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets44.1 +/- 23.8bp
Average Position of motif in Background55.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCCACA
TGGGGCCCAC-
 A C G T A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCCACA-----
CGAAGCACACAAAATA
 A C G T A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCCACA-----
AGCGGCACACACGCAA
 A C G T A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGCCCACA---
-NWAACCACADNN
 A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGGCCCACA
-CTGCCCGCA
 A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCCACA
AGGTGHCAGACA
 A C G T A C G T A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGGCCCACA---
--AAACCACAGAN
 A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCACA--
YCCGCCCACGCN
 A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTGGCCCACA
---ATCCAC-
 A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCCCACA-
AGGTGNCAGACAG
 A C G T A C G T A C T G A C G T A C T G A C T G A T G C T A G C A T G C C G T A A T G C C G T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G