Information for 4-AGACTACGTT (Motif 4)

C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T
Reverse Opposite:
C G T A C T G A A T G C C T A G A C G T C G T A A C T G A C G T A G T C A G C T
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.882
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 18.6bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGACTACGTT
BCAGACWA----
 A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGACTACGTT---
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGACTACGTT---
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACTACGTT---
NWTGATTRGRTTAWN
 A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGACTACGTT-
GCGACCACACTG
 A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGACTACGTT--
NTGATTAAATTAN
 A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGACTACGTT
CCAGACRSVB--
 A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGACTACGTT-
TGATTAAATTA
 C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGACTACGTT
CCAGACAG----
 A C G T A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGACTACGTT-----
TNAACGACGTCGNCCA
 A C G T C T G A A C T G C G T A A G T C A C G T C G T A A G T C T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A