Information for 9-GCCCACGCCA (Motif 15)

C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
Reverse Opposite:
G A C T A T C G T C A G A T G C A T C G A G C T A T C G A T C G C T A G G A T C
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.535
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif989.2
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets54.8 +/- 26.1bp
Average Position of motif in Background50.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCCACGCCA
-AGCGCGCC-
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCCACGCCA
ACGCCCACGCA-
 A C G T A C G T C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

EGR4/MA0733.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCCACGCCA--
TTACGCCCACGCATTT
 A C G T A C G T A C G T A C G T C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCCCACGCCA-----
GACCACGCCCTTATT
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCCACGCCA
YCCGCCCACGCN-
 A C G T A C G T A C G T C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCCCACGCCA
-CCCCCCCC-
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCCACGCCA
--CTAGGCCT
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCCACGCCA----
ATCCCCGCCCCTAAAA
 A C G T A C G T C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCCACGCCA--
-GCCACGCCCCC
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A A C G T A C G T
A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCCCACGCCA-
-----TGCCAA
 C T A G G A T C T A G C T A G C T C G A T A G C T A C G A G T C T A G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A