Information for 10-GCCAGAGGGCGCC (Motif 11)

C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C C A T G A G T C A T G C A G T C A C G T A G T C A C G T A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.355e+01
Information Content per bp:1.884
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif34.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.4 +/- 24.5bp
Average Position of motif in Background50.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGAGGGCGCC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGGCGCC
TGCCCNGGGGCA--
 A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCCAGAGGGCGCC
-----AGCGCGCC
 C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCCAGAGGGCGCC-----
--TTGGGGGCGCCCCTAG
 C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGGCGCC
TGTCAGGGGGCG--
 A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGGCGCC
TGCCCTNGGGCA--
 A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGAGGGCGCC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGGGCGCC
NTGCCCTTGGGCGN-
 A C G T A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGGCGCC
TGCCCTNGGGCA--
 A C G T C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCAGAGGGCGCC
GCCTCAGGGCAT-
 C T A G A G T C A G T C G T C A A C T G T G C A A C T G A T C G A C T G G A T C A C T G A G T C A T G C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T