Information for 5-VATGAGTCAT (Motif 4)

T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T
Reverse Opposite:
T C G A A C G T C T A G G C T A T A G C G C A T A T G C G T C A A G C T A G T C
p-value:1e-15
log p-value:-3.578e+01
Information Content per bp:1.430
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.80%
Number of Background Sequences with motif1142.4
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets48.5 +/- 24.2bp
Average Position of motif in Background49.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VATGAGTCAT
GATGAGTCAT
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VATGAGTCAT--
GATGAGTCATCC
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VATGAGTCAT
-ATGAGTCAT
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VATGAGTCAT-
GATGAGTCATN
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:VATGAGTCAT--
NATGASTCABNN
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-VATGAGTCAT-
NNATGAGTCATN
 A C G T T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:VATGAGTCAT-
NATGAGTCACN
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:VATGAGTCAT-
-ATGASTCATY
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T
A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:9
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-VATGAGTCAT-
NDATGASTCATH
 A C G T T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.93
Offset:0
Orientation:forward strand
Alignment:VATGAGTCAT
DATGASTCAT
 T C A G T C G A C A G T T A C G C G T A A T C G C G A T G A T C T G C A A G C T
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T