Information for 13-CAGTCTTGCA (Motif 14)

G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A
Reverse Opposite:
A C G T C T A G A G T C C G T A G T C A A C T G T G C A T G A C A C G T C A T G
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.830
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif165.3
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets39.3 +/- 22.8bp
Average Position of motif in Background47.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGTCTTGCA---
-GGGATTGCATNN
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGTCTTGCA---
-TGTCTGDCACCT
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGTCTTGCA-
-NATGTTGCAA
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGTCTTGCA---
CTGTCTGTCACCT
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCTTGCA----
ANATTTTTGCAANTN
 A C G T G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCTTGCA----
SCAGYCADGCATGAC
 A C G T G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL002.1_INR/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGTCTTGCA
TCAGTCTT---
 A C G T G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGTCTTGCA-
-GGTCTGGCAT
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGTCTTGCA--
-NATTGTGCAAT
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A A C G T A C G T
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGTCTTGCA
CTGTCTGG--
 G T A C C G T A A C T G A C G T T G A C C A G T A C G T A C T G G A T C C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T