Information for 9-TGGTTAGRAAGCC (Motif 10)

C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
Reverse Opposite:
A C T G C T A G A G T C C G A T A C G T A G C T A T G C C G A T T G C A G T C A A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.699
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.8 +/- 22.3bp
Average Position of motif in Background45.6 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTTAGRAAGCC
ACTAGTTAAC-----
 A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGTTAGRAAGCC
-GGTTAGAGACCT
 C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGTTAGRAAGCC
TATCATTAGAACGCT
 A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGGTTAGRAAGCC
GAAAACTAGTTAACATC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGGTTAGRAAGCC
TACCCTAGTTACCGA---
 A C G T A C G T A C G T A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGGTTAGRAAGCC----
-----AGGAAACAGCTG
 C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTTAGRAAGCC
ANNNCTAGTTAACNGNN-
 A C G T A C G T A C G T A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTAGRAAGCC
CTGTGGTTTN------
 A C G T A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGGTTAGRAAGCC
---TTTGAAACCG
 C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGGTTAGRAAGCC
GCTGTGGTTT-------
 A C G T A C G T A C G T A C G T C G A T T C A G A C T G A C G T A C G T C G T A A T C G T C G A C G T A C G T A A C T G A G T C G T A C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T