Information for 7-CGTGCCTCYCTGG (Motif 8)

G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
Reverse Opposite:
A G T C T A G C G T C A A T C G C T G A A C T G G C T A A C T G A T C G T G A C T G C A A T G C C T A G
p-value:1e-11
log p-value:-2.604e+01
Information Content per bp:1.672
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.60%
Number of Background Sequences with motif805.1
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets55.0 +/- 25.7bp
Average Position of motif in Background51.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTGCCTCYCTGG
GTCATGCHTGRCTGS
 A C G T A C G T G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTGCCTCYCTGG---
-ACCACTCTCGGTCAC
 G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGTGCCTCYCTGG
CNGTCCTCCC---
 G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCCTCYCTGG
NNACTTGCCTT-----
 A C G T A C G T A C G T G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCCTCYCTGG
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGTGCCTCYCTGG--
TACGAGACTCCTCTAAC
 A C G T A C G T G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGTGCCTCYCTGG
NCTTCCCGCCC---
 A C G T G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGTGCCTCYCTGG---
-AGTATTCTCGGTTGC
 G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGTGCCTCYCTGG------
---CAATCACTGGCAGAAT
 G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGTGCCTCYCTGG
--TTCCTCT----
 G A T C T A C G A C G T A C T G T A G C G T A C C G A T A G T C G A C T A T G C C A G T A T C G T C A G
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T