Information for 8-CGGGAGTGTT (Motif 13)

A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C T G C A A G T C A G C T A G T C A T G C G A T C A T C G
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.851
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif74.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets33.1 +/- 17.9bp
Average Position of motif in Background44.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGAGTGTT
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ETV6/MA0645.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGGAGTGTT
AGCGGAAGTG--
 A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGGGAGTGTT-
----ATTGTTA
 A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGGAGTGTT
CTYRAGTGSY
 A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGAGTGTT-
-TTRAGTGSYK
 A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ELK1/MA0028.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGGAGTGTT
ACCGGAAGTG--
 A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGTGTT
AACCGGAAGT---
 A C G T A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGGAGTGTT
CCGGAAGTGGC
 A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ETV3/MA0763.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGGAGTGTT
ACCGGAAGTG--
 A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
T C G A G A T C G A T C A C T G A C T G G T C A C G T A T C A G A G C T T C A G A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGGAGTGTT
AACCCGGAAGTG--
 A C G T A C G T A C G T A C G T A T G C C A T G T A C G C T A G C T G A A C T G A C G T A C T G A C G T A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T A C G T