Information for 7-GCCGGCTGAT (Motif 12)

A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T
Reverse Opposite:
T C G A C G A T A G T C C G T A A C T G A T G C A T G C C A T G A C T G A T G C
p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.848
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets56.6 +/- 23.3bp
Average Position of motif in Background49.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCCGGCTGAT-
-CCTGCTGAGH
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCGGCTGAT-
-CCAGCTGTTN
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCGGCTGAT-
-HCAGCTGDTN
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCGGCTGAT
---NGCTN--
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCCGGCTGAT-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGCTGAT
CCCCCTGCTGTG
 A C G T A C G T A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGGCTGAT
GCCATCTGTT
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGGCTGAT-------
ACCGGTTGATCACCTGA
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGGCTGAT
AACAGCTGAT
 A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGCTGAT---
TNTCCTGCTGTGNNG
 A C G T A C G T A T C G A G T C G T A C A T C G A T C G A G T C C G A T A C T G G C T A A G C T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G