Information for 8-CCAAGTAAAATAC (Motif 10)

A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C G T A T C G A T C G
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 26.5bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTAAAATAC-
TGCCAAAATAAACANN
 A C G T A C G T A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAAGTAAAATAC-
AACCCAATAAAATTCG
 A C G T A C G T A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCAAGTAAAATAC-------
---CATACAATACGAAATAA
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAAGTAAAATAC
CCYMATAAAA---
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAAGTAAAATAC-
CTACCAATAAAATTCT
 A C G T A C G T A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAAGTAAAATAC
GCTCGTAAAAA--
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAGTAAAATAC
-CCAATAAAAA--
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGTAAAATAC
GCAATAAAAA---
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGTAAAATAC
NCYAATAAAA---
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGTAAAATAC
AAAAGTCAA----
 A T G C T A G C C G T A C G T A A C T G A C G T G T C A C G T A C G T A C G T A A C G T C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T