Information for 4-ACGTGACCTG (Motif 7)

C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
Reverse Opposite:
G A T C T G C A A T C G A C T G C G A T A G T C C G T A G T A C A C T G A C G T
p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.840
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets46.1 +/- 26.1bp
Average Position of motif in Background51.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACCTG
TCACGTGACCGG
 A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACCTG
GCCACGTGACC--
 A C G T A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACCTG
NCACGTGACN--
 A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGACCTG
TCACGTGACC--
 A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACGTGACCTG
--GTGACCTT
 C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACCTG
GTCACGTGAC---
 A C G T A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACCTG
ATCACGTGAC---
 A C G T A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ACGTGACCTG
---TGACCT-
 C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ACGTGACCTG-
---TGACCTYA
 C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ACGTGACCTG
ATCACGTGAC---
 A C G T A C G T A C G T C G T A A G T C A C T G C G A T A C T G C G T A T G A C A T G C A C G T C T A G
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T