Information for 3-KCATCGGGAGCCC (Motif 5)

A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C T G C T G A A C G T A C T G T G A C
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 29.5bp
Average Position of motif in Background64.2 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:KCATCGGGAGCCC
-----CGGAGC--
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KCATCGGGAGCCC----
-NNNGGGGCGCCCCCNN
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:KCATCGGGAGCCC--
-----GGGAGGACNG
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--KCATCGGGAGCCC
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KCATCGGGAGCCC-
NNNACCGAGAGTNNN
 A C G T A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KCATCGGGAGCCC-
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KCATCGGGAGCCC
--ACCGGAAG---
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--KCATCGGGAGCCC
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:KCATCGGGAGCCC------
--NNNNTGAGCACTGTNNG
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:KCATCGGGAGCCC
-------CAGCC-
 A C G T A G T C C G T A A G C T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T