Information for 1-CTCCCGCCCTGGG (Motif 4)

A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
Reverse Opposite:
A T G C A G T C T A G C T C G A C A T G A C T G A C T G G T A C A T C G A T C G A C T G T C G A T C A G
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.745
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif410.8
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets49.6 +/- 26.6bp
Average Position of motif in Background49.5 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCGCCCTGGG
NCTTCCCGCCC----
 A C G T A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCGCCCTGGG
NNTTCCCGCCC----
 A C G T A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGCCCTGGG
GGTCCCGCCC----
 A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTCCCGCCCTGGG---
--CCCCCCCGGGGGNN
 A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCGCCCTGGG
TTTCCCGCCMAV--
 A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCGCCCTGGG
NYTTCCCGCC-----
 A C G T A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCCCGCCCTGGG
TTCCCGCCWG---
 A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCCCGCCCTGGG
VDTTTCCCGCCA----
 A C G T A C G T A C G T A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCCGCCCTGGG---
-ACCCCCCCGGGGGGN
 A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G A C G T A C G T A C G T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCCCGCCCTGGG---
-NCCCCCCCGGGGGGN
 A G T C A G C T T G A C A T G C T A G C C A T G T G A C T G A C G T A C A G C T A T C G A C T G A T C G A C G T A C G T A C G T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G