Information for 2-ATGTGGTTTC (Motif 2)

G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
Reverse Opposite:
T C A G G T C A C T G A T C G A G T A C A G T C C T G A G T A C G T C A C G A T
p-value:1e-16
log p-value:-3.771e+01
Information Content per bp:1.598
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif1715.4
Percentage of Background Sequences with motif3.55%
Average Position of motif in Targets48.6 +/- 23.9bp
Average Position of motif in Background50.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
NNTGTGGTTT-
 A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
CTGTGGTTTN
 G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
TTGCGGTTT-
 G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
TTTGCGGTTT-
 A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC
GCTGTGGTTT-
 A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATGTGGTTTC--
-TGTGGATTNNN
 G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC-
NNTGTGGATTSS
 A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTC
TGCTGTGATTT-
 A C G T A C G T G C T A C A G T A C T G G A C T A C T G A C T G A G C T A G C T C A G T A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T