Information for 15-WCARASCCRGGGA (Motif 17)

C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C A G T C A G T C A C T G A C T G A T G C A C G T A G T C A C G T A C T G C G A T
p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.1 +/- 29.6bp
Average Position of motif in Background59.0 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:forward strand
Alignment:WCARASCCRGGGA
-------TGGGGA
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WCARASCCRGGGA-
ACATGCCCGGGCAT
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WCARASCCRGGGA
-CACAGCAGGGGG
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:WCARASCCRGGGA--
-CACAGCGGGGGGTC
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-WCARASCCRGGGA-------
TTCAGCACCATGGACAGCGCC
 A C G T C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WCARASCCRGGGA-------
TCAGCACCATGGACAGCTCC
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:WCARASCCRGGGA-
----WDNCTGGGCA
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:WCARASCCRGGGA--
---TCCCNNGGGACN
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:WCARASCCRGGGA
-TACATCCGGGT-
 C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-9
Orientation:forward strand
Alignment:---------WCARASCCRGGGA
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T A G C G T A A T C G A G T C A G T C C T A G A C T G A C T G A C T G G T C A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T