Information for 6-CTGCTCCGGGCGG (Motif 6)

A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C T G A C C A T G A C T G G T C A A C T G A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.822e+01
Information Content per bp:1.887
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.1 +/- 24.1bp
Average Position of motif in Background55.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGCTCCGGGCGG
--GCTCCG-----
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGCTCCGGGCGG
CTGTTCCTGG---
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCTCCGGGCGG
CNGTCCTCCC-----
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCTCCGGGCGG-----
-ANTNCCGGGGGGAANTT
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCTCCGGGCGG
----TNNGGGCAG
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCTCCGGGCGG-
CACCCCCGGGGGGG
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTCCGGGCGG-
ACCCCCCCGGGGGGN
 A C G T A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGCTCCGGGCGG--
CCCCCCCGGGGGGGT
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGCTCCGGGCGG-
NNGCNCTGCGCGGC
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGCTCCGGGCGG
-NGCCTGAGGCN-
 A G T C A C G T A C T G A G T C A C G T A G T C G A T C A C T G A C T G A C T G A G T C A C T G A C T G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T