Information for 7-AGACCTGCTG (Motif 17)

C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G
Reverse Opposite:
A G T C C G T A C A T G A G T C C G T A A C T G A T C G A C G T A G T C A G C T
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.748
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif1138.0
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets49.0 +/- 26.8bp
Average Position of motif in Background48.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGACCTGCTG---
---CCTGCTGAGH
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGACCTGCTG
--ANCAGCTG
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG-----
TNTCCTGCTGTGNNG
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG-----
NNTCCTGCTGTGNNN
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG-----
TCNCCTGCTGNGNNN
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGACCTGCTG-
-CAGCAGCTGN
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG---
CCACCTGTTGCAT
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGACCTGCTG---
ANCCACCTGTTGCNC
 A C G T A C G T C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG--
NNAGCAGCTGCT
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGACCTGCTG--
CCCCCTGCTGTG
 C T G A A C T G T G C A T A G C G T A C G C A T C T A G G T A C C G A T A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G