Information for 2-CAGAAGGCAGCTGGGA (Motif 5)

A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
Reverse Opposite:
C A G T A T G C A G T C A G T C C G T A A C T G A G T C A C G T A C T G A T G C A G T C G A C T A C G T A T G C G A C T A C T G
p-value:1e-16
log p-value:-3.691e+01
Information Content per bp:1.853
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 14.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CAGAAGGCAGCTGGGA
-----GACAGCTGCAG
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CAGAAGGCAGCTGGGA-
-----NVCAGCTGBBNN
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:CAGAAGGCAGCTGGGA
------GCAGCTGTNN
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGAAGGCAGCTGGGA
----NAHCAGCTGD--
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAGAAGGCAGCTGGGA
--NGNGACAGCTGCN-
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CAGAAGGCAGCTGGGA
-----CGCAGCTGCG-
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CAGAAGGCAGCTGGGA
-----AACAGCTGCAG
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAGAAGGCAGCTGGGA
---VNAVCAGCTGGC-
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CAGAAGGCAGCTGGGA
----CAGCAGCTGN--
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CAGAAGGCAGCTGGGA
------VCAGCTGBNN
 A G T C C G T A A T C G C G T A C G T A A C T G A T C G A G T C C G T A A C T G A G T C A C G T A C T G C T A G A T C G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C