Information for 3-CKCCCTCTAGTGG (Motif 3)

A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A T A G C G C A T C G T A C T A G T C G A A C T G A C T G C T A G G T A C C T A G
p-value:1e-18
log p-value:-4.163e+01
Information Content per bp:1.691
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif149.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets45.0 +/- 21.6bp
Average Position of motif in Background49.2 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.86
Offset:-6
Orientation:forward strand
Alignment:------CKCCCTCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CKCCCTCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----CKCCCTCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CKCCCTCTAGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:CKCCCTCTAGTGG--
---------GTGGAT
 A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CKCCCTCTAGTGG-
----NTCAAGTGGN
 A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CKCCCTCTAGTGG
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CKCCCTCTAGTGG
GCCGCCATCTTG---
 A C G T A C G T A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CKCCCTCTAGTGG-
CACCCCCGGGGGGG
 A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CKCCCTCTAGTGG----
NANTTTCAAGTGGTTAN
 A G T C C A T G A G T C G T A C G T A C A G C T A G T C G C A T C G T A A T C G G C A T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T