Information for 8-GAAGGTCAAC (Motif 9)

A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
Reverse Opposite:
C T A G A C G T A C G T A T C G T G C A A G T C A T G C A G C T A C G T T G A C
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.2 +/- 25.9bp
Average Position of motif in Background49.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTCAAC
TCAAGGTCAT-
 A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGTCAAC
TCAAGGTCAN-
 A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GAAGGTCAAC
-AAGGTCAC-
 A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTCAAC
TCAAGGTCATA
 A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GAAGGTCAAC---
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GAAGGTCAAC
CAAGGHCANV
 A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GAAGGTCAAC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTCAAC--
CAAAGGTCAAGGG
 A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAAGGTCAAC
ATCAAGGTCA--
 A C G T A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAAGGTCAAC
BTCAAGGTCA--
 A C G T A C G T A C T G C G T A C T G A T A C G A C T G A C G T A T G C C G T A C G T A G A T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T