Information for 7-GCGTAGTGTA (Motif 8)

T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A
Reverse Opposite:
C A G T T G C A T A G C T C G A T G A C G A C T G C T A T G A C T A C G A G T C
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.669
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif279.6
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets50.1 +/- 22.3bp
Average Position of motif in Background49.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGTAGTGTA----
TCGCGAAGGTTGTACT
 A C G T A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGTAGTGTA-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCGTAGTGTA-
-TTRAGTGSYK
 T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGTAGTGTA
TGCGTG-----
 A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTAGTGTA
NANAAGGGCGTGGTC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCGTAGTGTA----
TCCGTCGCTTAAAAG
 A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCGTAGTGTA
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTAGTGTA--
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGTAGTGTA
GGCGCGCT---
 A C G T T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCGTAGTGTA-
-----GTGGAT
 T A C G A T G C A C T G C G A T C T G A A C T G A G C T A T C G A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T